|
Typographic conventions:
| Name | Module(s) | Description |
|---|---|---|
| /usr/share/modulefiles | NOT FOUND | |
| ABAQUS | abaqus | ABAQUS is a software suite for finite element analysis and computer-aided engineering (website) keywords: engineering materials-science |
| ABINIT | abinit | ABINIT is a package whose main program allows one to find the total energy, charge density and electronic structure of systems made of electrons and nuclei (website) keywords: chemistry materials-science molecular-dynamics particle-physics plasma-physics quantum |
| AGATE | agate | Agate is mainly designed to work with the Abinit DFT code. However, it can perfectly read some VASP files and other commonly used format. Agate should help you to visualize in a glance any input file to make sure the structure you're simulating is the one you want. |
| Amber | amber | The Amber Molecular Dynamics Package (website, documentation) keywords: chemistry molecular-dynamics language |
| ANSYS | ansys | Flow modeling simulation software (website) keywords: cfd engineering solver |
| Code_Aster | aster | Code_Aster is a thermomechanics and analysis of structure package (website) keywords: solver |
| ANSYS Autodyn | autodyn | ANSYS Autodyn software is a versatile explicit analysis tool for modeling the nonlinear dynamics of solids, fluids, gases and their interactions. (website) keywords: cfd engineering solver |
| blastFoam | blastfoam | blastFoam is a solver for multi-phase compressible flow with application to high-explosive detonation, explosive safety and airblast, as well as general compressible flows |
| cantera | cantera | Cantera is an open-source suite of tools for problems involving chemical kinetics, thermodynamics, and transport processes. |
| CP2K | cp2k | CP2K performs atomistic and molecular simulations of solid state, liquid, molecular and biological systems (website) keywords: materials-science molecular-dynamics quantum |
| CPMD | cpmd | The CPMD code is a parallelized plane wave/pseudopotential implementation of Density Functional Theory, particularly designed for ab-initio molecular dynamics. (website) keywords: chemistry materials-science molecular-dynamics particle-physics quantum |
| CSD-Discovery | csd-discovery | For pharmaceutical and agrochemical researchers, CSD-Discovery provides in one place all the tools you need for discovering new molecules |
| DLPOLY | dl_poly_classic | DL_POLY Classic is a general purpose (parallel and serial) molecular dynamics simulation package (website) keywords: chemistry materials-science molecular-dynamics molecular-mechanics particle-physics |
| ESPRESSO | espresso | Quantum ESPRESSO is an integrated suite of computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials (both norm-conserving and ultrasoft). (website) keywords: chemistry materials-science molecular-dynamics particle-physics plasma-physics quantum |
| fhi-aims | fhi_aims | FHI-aims is an efficient, accurate all-electron, full-potential electronic structure code package for computational molecular and materials science (non-periodic and periodic systems) |
| Fluka | fluka | FLUKA is a general purpose tool for calculations of particle transport and interactions with matter, covering an extended range of applications spanning from proton and electron accelerator shielding to target design, calorimetry, activation, dosimetry, detector design, Accelerator Driven Systems, cosmic rays, neutrino physics, radiotherapy etc. (website) keywords: particle-physics |
| Formation | formation-base | formation-base is a module used to set up the environment for the online training session on cobalt supercomputer |
| Formation | formation-mpi-openmp | formation-mpi-openmp is a module used to set up the environment for the online training session on cobalt supercomputer |
| Gaussian | gaussian | Gaussian is a computational chemistry software package (website) keywords: chemistry materials-science molecular-dynamics particle-physics quantum solver |
| Geant | geant | Toolkit for the simulation of the passage of particles through matter (website) keywords: astrophysics |
| GMSH | gmsh | Gmsh is a 3D finite element grid generator with a build-in CAD engine and post-processor (website) keywords: cfd engineering mesh processing |
| GMT | gmt | Generic Mapping Tools (website) keywords: processing |
| Gromacs | gromacs | GROMACS (GROningen MAchine for Chemical Simulations) is a molecular dynamics simulation package (website) keywords: chemistry materials-science molecular-dynamics molecular-mechanics particle-physics |
| LAMMPS | lammps | LAMMPS is a molecular dynamics code, an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator (website) keywords: chemistry materials-science molecular-dynamics molecular-mechanics particle-physics plasma-physics |
| ls-dyna | ls-dyna | LS-DYNA est un progiciel de calcul aux éléments finis de dynamique rapide développé par Livermore Software Technology Corporation (LSTC). |
| ls-prepost | ls-prepost | LS-PrePost is an advanced pre and post-processor that is delivered free with LS-DYNA. The user interface is designed to be both efficient and intuitive. LS-PrePost runs on Windows, Linux, and Macs utilizing OpenGL graphics to achieve fast rendering and XY plotting. |
| MaterialsStudio | materialsstudio | Solve key materials and chemical research problems (website) keywords: engineering solver materials-science |
| NAMD | namd | NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems (website) keywords: chemistry materials-science molecular-dynamics molecular-mechanics particle-physics |
| nanofluidx | nanofluidx | nanoFluidX is a particle-based hydrodynamics (SPH) simulation tool to predict fluid flow around complex geometries while in complicated motion. It is used for a variety of applications such as simulating oiling within conventional high-performance or electric vehicle powertrain systems comprising rotating gears, analyzing forces on individual components of the system or water management (wading, sloshing…).11 |
| NEST is a simulator for spiking neural network | nest | NEST is a simulator for spiking neural network models that focuses on the dynamics, size and structure of neural systems rather than on the exact morphology of individual neurons |
| NWChem | nwchem | High performance computational chemistry software (website) keywords: chemistry materials-science molecular-dynamics molecular-mechanics particle-physics quantum |
| openbabel | openbabel | Chemical toolbox designed to speak the many languages of chemical data |
| OpenFOAM+ | openfoam-plus | OpenFOAM distributed by OpenCFD (Open Source suite for field operations and manipulations). |
| OpenFOAM | openfoam | Open Source suite for field operations and manipulations. (website) keywords: cfd library solver |
| opengate | opengate | GATE is an advanced opensource software developed by the international OpenGATE collaboration and dedicated to numerical simulations in medical imaging and radiotherapy. It currently supports simulations of Emission Tomography (Positron Emission Tomography - PET and Single Photon Emission Computed Tomography - SPECT), Computed Tomography (CT), Optical Imaging (Bioluminescence and Fluorescence) and Radiotherapy experiments. Using an easy-to-learn macro mechanism to configurate simple or highly sophisticated experimental settings, GATE now plays a key role in the design of new medical imaging devices, in the optimization of acquisition protocols and in the development and assessment of image reconstruction algorithms and correction techniques. It can also be used for dose calculation in radiotherapy experiments. |
| ospray | ospray | OSPRay OverviewIntel OSPRay is anopen source,scalable, andportableraytracing engine for high-performance, high-fidelity visualization on Intel Architecture CPUs. |
| plink | plink | This is a comprehensive update to Shaun Purcell's PLINK command-line program |
| polaris | polaris | POLARIS(MD) is a software package for polarizable molecular dynamics simulations. (website) |
| PowerAcoustics | poweracoustics | PowerACOUSTICS - Simulation Software |
| PowerFlow | powerflow | Exa's PowerFLOW CFD solution performs simulations that accurately predict real world conditions. keywords: graphic processing visualisation |
| Salome | salome | SALOME is an open-source software that provides a generic platform for Pre- and Post-Processing for numerical simulation. It is based on an open and flexible architecture made of reusable components. (website, documentation) keywords: graphic processing visualisation |
| saturne | saturne | Code_Saturne is a EDF's general purpose Computational Fluid Dynamics (CFD) software (website) keywords: solver cfd |
| saturne | saturne | Code_Saturne is a EDF's general purpose Computational Fluid Dynamics (CFD) software (website) keywords: solver cfd |
| Schrodinger software suite | schrodinger | Schrodinger software suite (website) keywords: chemistry materials-science molecular-dynamics molecular-mechanics particle-physics quantum |
| SIESTA | siesta | Spanish Initiative for Electronic Simulations with Thousands of Atoms (website) keywords: molecular-dynamics quantum |
| Smilei | smilei | Smilei is a Particle-In-Cell code for plasma simulation. Open-source, collaborative, user-friendly and designed for high performances on super-computers, it is applied to a wide range of phy sics studies |
| sparsehash | sparsehash | An extremely memory-efficient hash_map implementation, with only 2 bits/entry overhead. |
| STAR-CCM | star-ccm | STAR-CCM+ is unrivalled in its ability to tackle problems involving multi-physics and complex geometries. (website) keywords: engineering solver |
| TURBOMOLE | turbomole | Program Package for ab initio Electronic Structure Calculations (website) keywords: chemistry materials-science molecular-dynamics particle-physics quantum |
| VASP | vasp | VASP Vienna Ab-initio Simulation Package (website) keywords: chemistry materials-science molecular-dynamics particle-physics quantum |
| VASP | vasp | VASP Vienna Ab-initio Simulation Package (website) keywords: chemistry materials-science molecular-dynamics particle-physics quantum |
| VASP | vasp | VASP Vienna Ab-initio Simulation Package (website) keywords: chemistry materials-science molecular-dynamics particle-physics quantum |
| WGRIB | wgrib2 | WGRIB is a program to manipulate, inventory and decode GRIB file |
| WPS | wps | The Weather Research and Forecasting (WRF) Model is a next-generation mesoscale numerical weather prediction system designed to serve both atmospheric research and operational forecasting needs. WPS is the WRF Preprocessing System. |
| WRF | wrf | The Weather Research and Forecasting (WRF) Model is a next-generation mesoscale numerical weather prediction system designed to serve both atmospheric research and operational forecasting needs (website) keywords: climate environmental-science |
| XFlow | xflow | SIMULIA XFlow Software. |
| Name | Module(s) | Description |
|---|---|---|
| XFlow | /usr/share/modulefiles | NOT FOUND |
| Intel Advisor | advisor | Threading design and prototyping tool for software architects (website) keywords: development profiler |
| ant | ant | Apache Ant is a Java library and command-line tool whose mission is to drive processes described in build files as targets and extension points dependent upon each other. The main known usage of Ant is the build of Java applications. (website) keywords: apache java |
| antlr | antlr | ANTLR (ANother Tool for Language Recognition) is a powerful parser generator for reading, processing, executing, or translating structured text or binary files |
| Arm-Forge | arm-forge | C, C++ and F90 profiler and parallel Debugger for high performance and multithreaded Linux applications (DDT, MAP...) |
| Autoconf | autoconf | Autoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages. (website) keywords: development |
| Automake | automake | Automake is a tool for automatically generating Makefile.in files compliant with the GNU Coding Standards. (website) keywords: development |
| Blender | blender | Blender is the free and open source 3D creation suite. |
| CDO | cdo | CDO (Climate Data Operators) is a collection of command line Operators to manipulate and analyse Climate and NWP model Data. (website) keywords: processing |
| Cmake | cmake | Cross-platform, open-source build system (website) keywords: development |
| CppUnit | cppunit | Unit testing framework module for the C++ programming language, described as a C++ port of JUnit. (website) keywords: development |
| Cube | cube | Cube, which is used as performance report explorer for Scalasca and Score-P (website, documentation) keywords: profiler visualisation |
| cubegui | cubegui | cubegui, which is used as performance report explorer for Scalasca and Score-P |
| cubelib | cubelib | cubelib, which is used as performance report explorer for Scalasca and Score-P |
| Cubew | cubew | Cubew, which is used as performance report explorer for Scalasca and Score-P |
| cxxtest | cxxtest | CxxTest is a unit testing framework for C++ |
| DARSHAN | darshan | Scalable HPC I/O characterization tool designed to capture an accurate picture of application I/O behavior, including properties such as patterns of access within files, with minimum overhead. (website, documentation) keywords: profiler io |
| GNU DDD | ddd | GNU DDD (Data Display Debugger), graphical front-end for GDB debugger (website) keywords: debugger |
| Dmtcp | dmtcp | DMTCP (Distributed MultiThreaded Checkpointing) transparently checkpoints a single-host or distributed computation in user-space -- with no modifications to user code or to the O/S. (website) keywords: distributed multithreaded checkpointing |
| Doxygen | doxygen | Doxygen is the de facto standard tool for generating documentation from annotated C++ sources, but it also supports other popular programming languages such as C, Objective-C, C#, PHP, Java, Python, IDL (Corba and Microsoft flavors), Fortran, VHDL, Tcl, and to some extent D. (website) keywords: development |
| ElectricFence | electricfence | A debugger which detects memory allocation violations (website) keywords: debugger |
| embree | embree | High Performance Ray Tracing Kernels - Homepage |
| Extrae | extrae | Generate tracefiles which can be analyzed later by Paraver |
| extrap | extrap | Extra-P is an automatic performance-modeling tool that supports the user in the identification of scalability bugs. |
| EZTrace | eztrace | Parallel profiling software (website) keywords: profiler |
| ffmpeg | ffmpeg | FFmpeg is the leading multimedia framework, able to decode, encode, transcode, mux, demux, stream, filter and play pretty much anything that humans and machines have created. |
| GDB | gdb | A GNU source-level debugger for C, C++, Java and other languages (website) keywords: debugger |
| Geany | geany | Geany is a powerful, stable and lightweight programmer's text editor that provides tons of useful features without bogging down your workflow. |
| Git | git | Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency (website) keywords: development |
| Gitlab-runner | gitlab-runner | GitLab Runner is the open source project that is used to run your jobs and send the results back to GitLab. It is used in conjunction with GitLab CI, the open-source continuous integration service included with GitLab that coordinates the jobs. |
| GLoST | glost | Greedly Launcher of Small Tasks (website) keywords: runtime |
| googletest | googletest | Google's framework for writing C++ tests on a variety of platforms |
| GPERF | gperf | GNU gperf is a perfect hash function generator. For a given list of strings, it produces a hash function and hash table, in form of C or C++ code, for looking up a value depending on the input string. (website) keywords: hash function generator |
| gprof | gprof | The GNU Profiler (website) keywords: profiler |
| GPROF2DOT | gprof2dot | This is a Python script to convert the output from many profilers into a dot graph. keywords: profiler |
| Guile | guile | Guile is a programming language designed to help programmers create flexible applications that can be extended by users or other programmers with plug-ins, modules, or scripts. |
| HPCToolkit | hpctoolkit | HPCToolkit is an integrated suite of tools for measurement and analysis of program performance on computers ranging from multicore desktop systems to the nation's largest supercomputers. (website) keywords: profiler |
| Hpctraceviewer | hpctraceviewer | viewer for trace format from hpctoolkit |
| Hpcviewer | hpcviewer | hpcviewer is a graphical user interface that interactively presents performance data in three complementary code-centric views (top-down, bottom-up, and flat), as well as a graphical view that enables one to assess performance variability across threads and processes. |
| Hwloc | hwloc | The Portable Hardware Locality (hwloc) software package provides a portable abstraction (across OS, versions, architectures, ...) of the hierarchical topology of modern architectures, including NUMA memory nodes, sockets, shared caches, cores and simultaneous multithreading. It also gathers various system attributes such as cache and memory information. It primarily aims at helping applications with gathering information about modern computing hardware so as to exploit it accordingly and efficiently. (website) keywords: library runtime |
| IgProf | igprof | the Ignominous Profiler (website) keywords: profiler |
| Intel Inspector | inspector | Memory and thread debugger (website) keywords: development debugger |
| Intelpython2 | intelpython2 | Intel Distribution for Python |
| Intelpython3 | intelpython3 | Intel Distribution for Python 3 |
| Intel Software Development Emulator | intelsde | Intel is releasing this Intel SDE so that developers can gain familiarity with our upcoming instruction set extensions. (website) keywords: development profiler |
| intltool is a set of tools to centralize translation of many different file formats using GNU gettext-compatible PO files. | intltool | intltool is a set of tools to centralize translation of many different file formats using GNU gettext-compatible PO files. |
| IPM | ipm | IPM is a portable profiling infrastructure for parallel codes. (website) keywords: profiler |
| Itac | itac | Intel Trace Analyzer and Collector (website) keywords: profiler |
| Julia | julia | high-level, high-performance dynamic programming language for technical computing (website) keywords: interpreter language |
| KCachegrind | kcachegrind | cachegrind Graphical Front-End (website) keywords: profiler |
| LCOV | lcov | Designed to support Linux kernel coverage measurements |
| libarchive | libarchive | Multi-format archive and compression library |
| libtool | libtool | GNU libtool is a generic library support script. Libtool hides the complexity of using shared libraries behind a consistent, portable interface. (website) keywords: library |
| Makedepf90 | makedepf90 | Makedepf90 is a program for automatic creation of Makefile-style dependency lists for Fortran source code. |
| malp | malp | MALP stands for Multi-Application on-Line Profiling. It is an online performance tracing tool aiming at overcoming common file-system limitations by relying on runtime coupling between running applications (website) keywords: profiler |
| Malt | malt | Find where you allocate your memory and how, reduce the memory footprint of your applications and limit overhead of memory management. |
| Maqao | maqao | Modular Assembly Quality Analyzer and Optimizer. (website) keywords: profiler |
| Matlab | matlab | MATLAB is a high-level language and interactive environment that enables you to perform computationally intensive tasks faster than with traditional programming languages such as C, C++, and Fortran. (website) keywords: graphic interpreter language mathematics processing visualisation |
| memleax | memleax | memleax debugs memory leak of a running process by attaching it, without recompiling or restarting. (website) keywords: debugger |
| Memonit | memonit | Memonit is a tool developed by TGCC staff in order to monitor the memory consumption of a job during time keywords: profiling |
| Mercurial | mercurial | Mercurial is a free, distributed source control management tool. It efficiently handles projects of any size and offers an easy and intuitive interface (website) keywords: development engineering |
| mmg | mmg | Mmg is an open source software for simplicial remeshing. |
| mono | mono | Cross platform, open source .NET framework |
| mpifileutils | mpifileutils | mpiFileUtils provides both a library called libmfu and a suite of MPI-based tools to manage large datasets, which may vary from large directory trees to large files. |
| MPlayer | mplayer | MPlayer is a movie player which runs on many systems |
| NCO | nco | The netCDF Operators (NCO) comprise command-line programs that take netCDF or HDF files as input, then operate and output the results to screen or files (website) keywords: processing |
| Ninja | ninja | A small build system with a focus on speed. |
| Nodejs | nodejs | Node.js is a platform built on Chrome's JavaScript runtime for easily building fast, scalable network applications. Node.js uses an event-driven, non-blocking I/O model that makes it lightweight and efficient, perfect for data-intensive real-time applications that run across distributed devices. |
| Numaprof | numaprof | Find where you make remote, local and MCDRAM memory accesses and where you pin the memory by making first touch accesses |
| Octave | octave | Octave is a high-level interpreted language, primarily intended for numerical computations (website) keywords: graphic interpreter language mathematics processing visualisation |
| Opari2 | opari2 | OPARI2, the successor of Forschungszentrum Juelich's OPARI,is a source-to-source instrumentation tool for OpenMP and hybrid codes. It surrounds OpenMP directives and runtime library calls with calls to the POMP2 measurement interface. (website, documentation) keywords: profiler |
| opencascade | opencascade | Open CASCADE Technology (OCCT) is an object-oriented C++ class library designed for rapid production of sophisticated domain-specific CAD/CAM/CAE applications. |
| OTF | otf | The Open Trace Format (OTF) is a new trace definition and representation for use with large-scale parallel platforms. OTF addresses three objectives (website) keywords: profiler |
| OTF2 | otf2 | The Open Trace Format 2 is a highly scalable, memory efficient event trace data format plus support library. It will become the new standard trace format for Scalasca, Vampir, and Tau and is open for other tools (documentation) keywords: profiler |
| Pandoc | pandoc | Pandoc is a Haskell library for converting from one markup format to another, and a command-line tool that uses this library (website) keywords: document converter |
| PAPI | papi | Performance Application Programming Interface (website) keywords: library profiler |
| Paraver | paraver | Software Tool for profiling parallel softwares (website) keywords: profiler |
| PDToolkit | pdtoolkit | Program Database Toolkit (PDT) is a framework for analyzing source code written in several programming languages and for making rich program knowledge accessible to developers of static and dynamic analysis tools |
| pdwfs | pdwfs | pdwfs (we like to pronounce it 'padawan-f-s', see below) is a preload library implementing a distributed in-memory filesystem in user space suitable for intercepting bulk I/O workloads typical of HPC simulations. |
| Perl | perl | Perl 5 is a highly capable, feature-rich programming language with over 25 years of development. (website) keywords: interpreter language |
| PGI Debugger | pgdb | PGI Debugger (pgdb) (website) keywords: debugger |
| pigz | pigz | Parallel implementation of gzip (website) keywords: io processing |
| Pin | pin | Pin is a dynamic binary instrumentation framework for the IA-32 and x86-64 instruction-set architectures that enables the creation of dynamic program analysis tools. (website) keywords: profiler runtime |
| Python | python | Python programming language (website, documentation) keywords: interpreter language |
| Python 3 | python3 | Python 3 programming language |
| R lang | r | R programming language (website) keywords: interpreter language mathematics visualisation |
| Redis | redis | Redis is an open source (BSD licensed), in-memory data structure store, used as a database, cache and message broker. |
| ROOT | root | The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way. (website) keywords: processing |
| rstudio | rstudio | RStudio is an integrated development environment (IDE) for R. (website, documentation) keywords: language development |
| Ruby | ruby | Ruby is a dynamic, open source programming language with a focus on simplicity and productivity. It has an elegant syntax that is natural to read and easy to write. (website) keywords: interpreter language |
| Scalasca | scalasca | Software tool for measuring and analyzing performances of parallel programs (website) keywords: profiler |
| SCons | scons | Open Source software construction tool (website) keywords: development |
| Score-P | scorep | the Scalable Performance Measurement Infrastructure for Parallel Codes is a software system that provides a measurement infrastructure for profiling, event trace recording, and online analysis of HPC applications (website) keywords: library profiler |
| SQLite | sqlite | SQLite is a C-language library that implements a small, fast, self-contained, high-reliability, full-featured, SQL database engine. |
| Subversion | subversion | Subversion is a concurrent version control system (website) keywords: development |
| SWIG | swig | SWIG is an interface compiler that connects programs written in C and C++ with scripting languages such as Perl, Python, Ruby, and Tcl. (website) keywords: development library |
| TAU | tau | TAU (Tuning and Analysis Utilities) is a portable profiling and tracing toolkit for performance analysis of parallel programs written in Fortran, C, C++, UPC, Java, Python (website) keywords: library profiler |
| Tcl | tcl | Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more. (with pthread support) (website) keywords: interpreter language |
| TexLive | texlive | TeX Live is an easy way to get up and running with the TeX document production system. (website) keywords: tex latex documents interpreter language |
| Tk | tk | Tk is a graphical user interface toolkit that takes developing desktop applications to a higher level than conventional approaches. (website) keywords: interpreter language |
| torch7 | torch7 | Torch is a scientific computing framework with wide support for machine learning algorithms that puts GPUs first. It is easy to use and efficient, thanks to an easy and fast scripting language, LuaJIT, and an underlying C/CUDA implementation. (website) keywords: deeplearning framework |
| TotalView | totalview | Dynamic source code and memory debugging for C, C++ and Fortran applications. (website) keywords: debugger |
| UDUnits | udunits | The UDUnits package from Unidata is a C-based package for the programatic handling of units of physical quantities. (website) keywords: library |
| AMD uProf | uprof | AMD uProf is a performance analysis tool for applications. It allows developers to better understand the runtime performance of their application and to identify ways to improve its performance. |
| OSSP uuid | uuid | OSSP uuid is a ISO-C (website) |
| Valgrind Tools | valgrind | Debugging and memory checking tools (website) keywords: profiler debugger |
| Vampir | vampir | Profiling tool for parallel programs (website) keywords: profiler |
| VampirServer | vampirserver | Profiling tool for parallel programs (website) keywords: profiler |
| Vdt | vdt | A collection of fast and inline implementations of mathematical functions |
| VEF-Prospector | vef | VEF-Prospector is an open-source package for profiling MPI application in order to generate VEF trace-files. The VEF traces can be read by the VEF-TraceLIB to feed any network simulator. |
| virtualenv | virtualenv | virtualenv is a tool to create isolated Python environments. |
| Intel VTune Amplifier | vtune | Performance profiler for serial and parallel performance analysis (website, documentation) keywords: profiler |
| xcrysden | xcrysden | XCrySDen is a crystalline and molecular structure visualisation program aiming at display of isosurfaces and contours, which can be superimposed on crystalline structures and interactively rotated and manipulated. (website) keywords: chemistry graphic processing visualisation |
| xmlto | xmlto | apply an XSL stylesheet to an XML document |
| zsh | zsh | Zsh is a shell designed for interactive use, although it is also a powerful scripting language. More information can be found on the Zsh Web Pages sites. (website) keywords: interpreter |
| Name | Module(s) | Description |
|---|---|---|
| zsh | /usr/share/modulefiles | NOT FOUND |
| EnSight | ensight | Post-processing and Visualization for Scientific Data (website) keywords: graphic processing visualisation |
| Ferret | ferret | Software for vizualisation and data analysing (website) keywords: graphic visualisation processing |
| GaussView | gaussview | GaussView is a Graphical User Interface to Gaussian (website) keywords: graphic processing solver visualisation |
| GhostScript | ghostscript | An interpreter for the PostScript language and for PDF, and related software and documentation (website) keywords: graphic processing visualisation |
| GLFW | glfw | GLFW is an Open Source, multi-platform library for OpenGL, OpenGL ES and Vulkan application development. It provides a simple, platform-independent API for creating windows, contexts and surfaces, reading input, handling events, etc. |
| Gnuplot | gnuplot | Gnuplot is a portable command-line driven graphing utility for Linux, OS/2, MS Windows, OSX, VMS, and many other platforms. (website) keywords: graphic processing visualisation |
| Grace | grace | Visualization software (website) keywords: graphic processing visualisation |
| GraphViz | graphviz | GraphViz toolbox (website) keywords: graphic library processing visualisation |
| gts | gts | GTS stands for the GNU Triangulated Surface Library. It is an Open Source Free Software Library intended to provide a set of useful functions to deal with 3D surfaces meshed with interconnected triangles. (website) |
| hdfview | hdfview | HDFView is a visual tool for browsing and editing HDF4 and HDF5 files. (website) keywords: hdf5 hdf4 java graphic io |
| IDL | idl | IDL is a solution for data analysis, data visualization, and software application development (website) keywords: graphic processing visualisation |
| imagemagick | imagemagick | Toolkit for manipulation of graphic images, including conversion of images between a variety of different formats (website) keywords: graphic processing visualisation |
| libpng | libpng | libpng is the official PNG reference library. (website) keywords: graphic library processing visualisation |
| libTIFF | libtiff | Provides support for the Tag Image File Format (TIFF), a widely used format for storing image data. (website) keywords: graphic library processing visualisation |
| Mesa | mesa | Mesa libGL/libGLU libraries (website) keywords: graphic library processing visualisation |
| NCL/NCAR Graphic | ncl_ncarg | NCAR Graphics is primarily a graphics package, with some limited data analysis through the Ngmath package. (website) keywords: graphic processing visualisation |
| Ncview | ncview | Ncview is a visual browser for netCDF format files (website) keywords: graphic processing visualisation |
| Paraview | paraview | Open source scientific visualization (website) keywords: graphic processing visualisation |
| ploticus | ploticus | Ploticus is a free GPL software utility that can produce various types of plots and graphs. (website) keywords: graphic processing visualisation |
| pyferret | pyferret | Software for vizualisation and data analysing |
| Qt | qt | Cross-platform application and UI development framework (website) keywords: graphic library |
| Qwt | qwt | Cross-platform application and UI development framework |
| TECPLOT | tecplot | Visualization software tool (website) keywords: engineering visualisation |
| VisIt | visit | VisIt - Visualization Tool (website) keywords: graphic processing visualisation |
| VMD | vmd | VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting. (website) keywords: chemistry materials-science molecular-dynamics molecular-mechanics particle-physics |
| VTK | vtk | The Visualization Toolkit (VTK) is an open-source, freely available software system for 3D computer graphics, image processing and visualization (website) keywords: library visualisation |
| wxWidgets | wxwidgets | C++ library that lets developers create applications (website) keywords: library |
| WXX11 | wxx11 | A cross-platform GUI and tools library for GTK, MS Windows, and MacOS. (website) keywords: library |
| YAML-CPP | yaml-cpp | yaml-cpp is a YAML parser and emitter in C++ matching the YAML 1.2 spec. |
| Name | Module(s) | Description |
|---|---|---|
| YAML-CPP | /usr/share/modulefiles | NOT FOUND |
| NVIDIA CUDA | cuda | CUDA (Compute Unified Device Architecture) development tools for NVIDIA GPU (website) keywords: compiler language |
| Mellanox hcoll | hcoll | Mellanox backend for MPI collectives |
| Intel SPMD Compiler | ispc | Intel SPMD Program Compiler (ISPC), an open-source compiler for high-performance SIMD programming on the CPU (website) keywords: compiler language |
| Intel MPI | mpi/intelmpi | Intel MPI Library (website, documentation) keywords: library runtime |
| MPC | mpi/mpc | The MPC (MultiProcessor Computing) framework provides a unified parallel runtime designed to improve the scalability and performances of applications running on clusters of large multiprocessor/multicore NUMA nodes. (website) keywords: library runtime |
| Nvidia OpenMPI | mpi/nvidiampi | Nvidia OpenMPI Library |
| Open MPI | mpi/openmpi (mpi/default) | Open source MPI-2 implementation (website) keywords: library runtime |
| Wi4MPI | mpi/wi4mpi | Allows to switch to any MPI implementation without recompiling |
| Name | Module(s) | Description |
|---|---|---|
| Wi4MPI | /usr/share/modulefiles | NOT FOUND |
| 2decomp_fft | 2decomp_fft | a library for large scale distributed FFT computation |
| AMD FFTW | amd-fftw | Fastest Fourier Transform in the West |
| Apache Portable Runtime | apr-util | Apache Portable Runtime libraries (website) keywords: apache library |
| Apache Portable Runtime | apr | Apache Portable Runtime libraries (website) keywords: apache library |
| ARMADILLO | armadillo | Armadillo is a high quality C++ linear algebra library, aiming towards a good balance between speed and ease of use (website) keywords: library mathematics |
| MKL BLAS routines | blas/mkl (blas/default) | Intel Math Kernel Library BLAS routines keywords: library mathematics |
| Netlib BLAS | blas/netlib | Netlib Basic Linear Algebra Subprograms keywords: library mathematics |
| AMD BLIS | blis | BLIS is a portable software framework for instantiating high-performance BLAS-like dense linear algebra libraries |
| Blitz | blitz | Blitz++ provides dense arrays and vectors, random number generators, and small vectors (useful for representing multicomponent or vector fields). (website) keywords: library mathematics solver |
| Boost | boost | Boost C++ libraries (website) keywords: library mathematics |
| cdat | cdat | Ultrascale Visualization Climate Data Analysis Tools |
| cgal | cgal | CGAL is a software project that provides easy access to efficient and reliable geometric algorithms in the form of a C++ library. (website) keywords: library mathematics |
| CGNS | cgns | CFD General Notation System (website) keywords: solver |
| CLN | cln | CLN (Class Library for Numbers) is a library for efficient computations with all kinds of numbers in arbitrary precision (website) keywords: mathematics |
| Cwipi | cwipi | A dynamic parallel code coupler and coupling with parallel interpolation interface (website, documentation) keywords: coupler |
| dtcmp | dtcmp | The Datatype Comparison (DTCMP) Library provides pre-defined and user-defined comparison operations to compare the values of two items which can be arbitrary MPI datatypes. |
| dyninst | dyninst | API for dynamic binary instrumentation. Modify programs while they are executing without recompiling, re-linking, or re-executing. |
| ecCodes GRIB encoding | eccodes | ecCodes provides an application programming interface and a set of tools for decoding and encoding messages in GRIB format |
| Eigen | eigen | Eigen is a C++ template library for linear algebra (website) |
| elfutils | elfutils | elf maniplation utilities |
| ELPA | elpa | Eigenvalue soLvers for Petaflop Applications (website) keywords: library |
| FFTW2 | fftw2 | Discrete Fourier Transform (website) keywords: library mathematics |
| FFTW3 | fftw3/gnu | Fastest Fourier Transform in the West (website) keywords: library mathematics |
| MKL FFTW3 routines | fftw3/mkl (fftw3/default) | Intel Math Kernel Library FFTW3 routines keywords: library mathematics |
| FFTW3 | fftw3/vanilla | Fastest Fourier Transform in the West |
| fltk | fltk | FLTK is a cross-platform C++ GUI toolkit for UNIX/Linux (website) keywords: library tool visualisation |
| fmt | fmt | fmt (formerly cppformat) is an open-source formatting library. It can be used as a fast and safe alternative to printf and IOStreams. |
| fox | fox | A Fortran library for XML |
| GDAL | gdal | gdal is a translator library for raster geospatial data formats that is released under an X/MIT style (website) keywords: processing |
| GEOS | geos | Geometry Engine Open Source (website) |
| Google Logging Library (glog) | glog | Google Logging Library (glog) is a library that implements application-level logging. (website) keywords: google logging library |
| GNU GLPK | glpk | The GLPK (GNU Linear Programming Kit) package is intended for solving large-scale linear programming (LP), mixed integer programming (MIP), and other related problems (website) keywords: mathematics |
| GMP | gmp | GMP is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating-point numbers. |
| gotcha | gotcha | C software library for shared library function wrapping, enables tools to intercept calls into shared libraries |
| graph-tool | graph-tool | Graph-tool is an efficient Python module for manipulation and statistical analysis of graphs |
| Grib | grib | The ECMWF GRIB API is an application program interface accessible from C and FORTRAN programs developed for encoding and decoding WMO FM-92 GRIB edition 1 and edition 2 messages. (website) keywords: climate environmental-science |
| GNU | gsl | GNU Scientific Library (GSL) is a numerical library for C and C++ programmers (website) keywords: mathematics |
| HDF5 | hdf5 | Hierarchical Data Format (website) keywords: io library |
| hpddm | hpddm | HPDDM is an efficient implementation of various domain decomposition methods (DDM) |
| Hypre | hypre | Hypre is a library for solving large, sparse linear systems of equations on massively parallel computers (website) keywords: library solver mathematics |
| Intel IPP | ipp | Intel Integrated Performance Primitives Library (website) keywords: library mathematics |
| jasper | jasper | Common jpeg library |
| MKL LAPACK routines | lapack/mkl (lapack/default) | Intel Math Kernel Library LAPACK routines keywords: library mathematics |
| Netlib LAPACK | lapack/netlib | Netlib Linear Algebra PACKage keywords: library mathematics |
| LaTeX2HTML | latex2html | LaTeX2HTML is a utility that converts LaTeX documents to web pages in HTML. (website) |
| libccc_user | libccc_user | libccc_user allows to access inside a job to information about execution time or memory consumed by the job (website) keywords: library |
| libcircle | libcircle | libcircle is an API for distributing embarrassingly parallel workloads using self-stabilization. |
| libcudacompat | libcudacompat | We define binary compatibility as a set of guarantees provided by the library, where an application targeting the said library will continue to work when dynamically linked against a different version of the library. |
| GD Graphics Library | libgd | GD is an open source code library for the dynamic creation of images by programmers. (website) keywords: graphics library |
| Libint | libint | a high-performance library for computing Gaussian integrals in quantum mechanics (website) keywords: library mathematics quantum |
| libmatheval | libmatheval | library for evaluating symbolic expressions (website) keywords: library mathematics symbolic expressions |
| libmpc | libmpc | Mpc is a C library for the arithmetic of complex numbers with arbitrarily high precision and correct rounding of the result. |
| Mini-XML | libmxml | Mini-XML is a small XML library that you can use to read and write XML and XML-like data files in your application without requiring large non-standard libraries |
| NAG Library | libnag | the NAG Library is a commercially available collection of numerical and statistical algorithms (website) keywords: library mathematics |
| The Mesa 3D Graphics Library | libosmesa | Mesa is an open-source implementation of the OpenGL specification - a system for rendering interactive 3D graphics. (website) keywords: 3d graphics library |
| libunwind | libunwind | A portable and efficient C programming interface (API) to determine the call-chain of a program |
| Libxc | libxc | a library of exchange-correlation functionals for density-functional theory (website) keywords: library mathematics |
| libxml2 | libxml2 | XML C parser and toolkit. |
| Libxsmm | libxsmm | LIBXSMM is a library for specialized dense and sparse matrix operations as well as for deep learning primitives such as small convolutions targeting Intel Architecture |
| lwgrp | lwgrp | The light-weight group library defines data structures and collective operations to group MPI processes as an ordered set. Such groups are useful as substitutes for MPI communicators when the overhead of communicator creation is too costly. |
| lz4 | lz4 | Extremely Fast Compression algorithm. |
| MAGMA | magma | Matrix Algebra on GPU and Multicore Architectures (website) keywords: library mathematics |
| Nvidia math libraries | math/nvidia | Nvidia math libraries (like blas) |
| mbedtls | mbedtls | mbed TLS (formerly known as PolarSSL) makes it trivially easy for developers to include cryptographic and SSL/TLS capabilities in their (embedded) products, facilitating this functionality with minimal coding footprint. |
| MED | med | The purpose of the MED module is to provide a standard for storing and recovering computer data associated to numerical meshes and fields, and to facilitate the exchange between codes and solvers. (website) keywords: cfd engineering mesh processing |
| MEMKIND | memkind | User Extensible Heap Manager built on top of jemalloc which enables control of memory characteristics and a partitioning of the heap between kinds of memory. |
| mesquite | mesquite | Mesh-Quality Improvement Library |
| METIS | metis | Serial Graph Partitioning and Fill-reducing Matrix Ordering (website) keywords: engineering solver library mathematics |
| Intel MKL | mkl | Intel Math Kernel Library (website) keywords: library mathematics |
| MKL-ML | mkl_ml | Intel Math Kernel Library for MKL-DNN |
| mpfr | mpfr | The MPFR library is a C library for multiple-precision floating-point computations with correct rounding. (website) keywords: library mathematics |
| Mumps | mumps | MUltifrontal Massively Parallel Sparse direct Solver (website) keywords: engineering library |
| nccl | nccl | Optimized primitives for collective multi-GPU communication (website) |
| NetCDF-CNetCDF-C HDF5 | netcdf-c | Network Common Data Form (C) |
| NetCDF-CXX4NetCDF-C HDF5 | netcdf-cxx4 | The netCDF-4 C++ API |
| NetCDF Fortran HDF5 | netcdf-fortran | Network Common Data Form fortran support lib |
| nlopt | nlopt | Library for nonlinear local and global optimization (website) keywords: mathematics library |
| OpenBLAS | openblas | OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. (website) keywords: library mathematics |
| OpenCV | opencv | Visualization software tool (website) keywords: graphic library processing visualisation |
| p3dfft | p3dfft | Scalable Framework for Three-Dimensional Fourier Transforms |
| ParMETIS | parmetis | Parallel Graph Partitioning and Fill-reducing Matrix Ordering (website) keywords: engineering solver library mathematics |
| PArpack | parpack | Parallel ARPACK (PARPACK) and ARPACK. ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems. (website) keywords: library mathematics solver |
| PaSTiX | pastix | Parallel Sparse Matrix Package (sparse linear solver) (website) keywords: engineering library mathematics solver |
| pcl | pcl | Portable Coroutine Library |
| pcre | pcre | The PCRE package contains Perl Compatible Regular Expression libraries. |
| PETSc | petsc | Portable and extensible toolkit for scientific computation (website) keywords: engineering library mathematics solver |
| Plumed | plumed | An open source library for free energy calculations in molecular systems which works together with some of the most popular molecular dynamics engines (website) keywords: library molecular-dynamics |
| Process Management Interface (PMI) for eXascale | pmix | Process Management Interface (PMI) is a means of exchanging wireup information needed for interprocess communication. PMI Exascale is an extended version of the PMI standard specifically designed to support clusters up to and including exascale sizes. |
| PNetCDF | pnetcdf | Parallel netCDF (PnetCDF) is an I/O library that supports data access to netCDF files in parallel (website) keywords: io library |
| prng | prng | Implementations of pseudorandom number generators |
| PROJ | proj | Cartographic Projections library (website) |
| PtScotch | ptscotch | Mesh generation library in Parallel (website) keywords: engineering solver library mathematics |
| pytorch | pytorch | An open source deep learning platform that provides a seamless path from research prototyping to production deployment. |
| MKL ScaLAPACK routines targeting <select mpi> | scalapack/mkl (scalapack/default) | Intel Math Kernel Library ScaLAPACK routines keywords: library mathematics |
| Netlib ScaLAPACK | scalapack/netlib | Netlib Scalable Linear Algebra PACKage keywords: library mathematics |
| Scotch | scotch | Mesh generation library (website) keywords: solver engineering library mathematics |
| serf | serf | High performance C-based HTTP client library built upon the Apache Portable Runtime (APR) library (website) keywords: apache http library |
| Mellanox backend | sharp | Mellanox backend for hcoll |
| Silo | silo | Silo is a library for reading and writing a wide variety of scientific data to binary, disk files. The files Silo produces and the data within them can be easily shared and exchanged between wholly independently developed applications running on disparate computing platforms. (website) keywords: library visualisation |
| SLEPc | slepc | Scalable Library for Eigenvalue Problem computation (website) keywords: library mathematics |
| Speos | speos | |
| SuiteSparse | suitesparse | a suite of sparse matrix software (website) keywords: library mathematics solver |
| Sundials | sundials | SUite of Nonlinear and DIfferential/ALgebraic equation Solvers (website) keywords: library |
| SuperLU | superlu | SuperLU is a general purpose library for the direct solution of large, sparse, nonsymmetric systems of linear equations on high performance machines |
| SuperLU_dist | superlu_dist | SuperLU is a general purpose library for the direct solution of large, sparse, nonsymmetric systems of linear equations on high performance machines |
| SuperLU_MT | superlu_mt | Multithreaded version of SuperLU (pthread or OpenMP) |
| Intel TBB | tbb | Intel Threading Building Blocks Library (website) keywords: library runtime |
| Tensorflow | tensorflow | An open-source software library for Machine Intelligence (website) keywords: deeplearning |
| Tetgen | tetgen | TetGen is a program to generate tetrahedral meshes of any 3D polyhedral domains. TetGen generates exact constrained Delaunay tetrahedralizations, boundary conforming Delaunay meshes, and Voronoi partitions. |
| Thrust | thrust | Thrust is a parallel algorithms library which resembles the C++ Standard Template Library (STL). |
| trilinos | trilinos | The Trilinos Project provides algorithms within an object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems. keywords: engineering library mathematics solver |
| Mellanox backend | ucx | Mellanox backend for IB |
| unuran | unuran | Collection of algorithms for generating non-uniform pseudorandom |
| voroplusplus | voroplusplus | Voro++ is a software library for carrying out three-dimensional computations of the Voronoi tessellation. |
| wannier90 | wannier90 | Wannier90 is an open-source code (released under GPLv2) for generating maximally-localized Wannier functions and using them to compute advanced electronic properties of materials with high efficiency and accuracy. |
| WI4PTHREAD | wi4pthread | Library developed by TGCC to solve threads placement issues on KNL partition |
| wxpropgrid | wxpropgrid | wxPropertyGrid is a specialized grid for editing properties such as strings, numbers, flagsets, fonts, and colours. |
| x264 | x264 | x264 is a library and application for encoding video streams into the H.264/MPEG-4 AVC compression format |
| xed | xed | The Intel X86 Encoder Decoder library for encoding and decoding x86 machine instructions (64- and 32-bit). Also includes libxed-ild,a lightweight library for decoding the length of an instruction. |
| xerces-c | xerces-c | Xerces-C++ is a validating XML parser written in a portable subset of C++. Xerces-C++ makes it easy to give your application the ability to read and write XML data. A shared library is provided for parsing, generating, manipulating, and validating XML documents using the DOM, SAX, and SAX2 |
| xz | xz | compression software |
| Zoltan | zoltan | Zoltan |
| Name | Module(s) | Description |
|---|---|---|
| Zoltan | /usr/share/modulefiles | NOT FOUND |
| The AOCC compiler system | aocc-compiler | The AOCC compiler system |
| The AOCL AMD Math Library | aocl-libm | The AOCL AMD Math Library |
| GNU C++ compiler | c++/gnu | GNU C++ compiler (g++) (website) keywords: compiler language |
| Intel C++ Compiler | c++/intel (c++/default) | Intel C++ compiler (icpc) (website) keywords: compiler language |
| Intel oneAPI C++ Compiler | c++/inteloneapi | Intel oneAPI C++ compiler (icpx) |
| LLVM C++ compiler | c++/llvm | LLVM C++ compiler (clang++) keywords: compiler language |
| Nvidia C++ compiler | c++/nvidia | Nvidia C++ compiler (nvc++) |
| PGI C++ compiler | c++/pgi | PGI C++ compiler (pgCC) (website) keywords: compiler language |
| GNU C compiler | c/gnu | GNU C compiler (gcc) (website) keywords: compiler language |
| Intel C Compiler | c/intel (c/default) | Intel C compiler (icc) (website) keywords: compiler language |
| Intel oneAPI C Compiler | c/inteloneapi | Intel oneAPI C compiler (icx) |
| LLVM C compiler | c/llvm | LLVM C compiler (clang) keywords: compiler language |
| Nvidia C compiler | c/nvidia | Nvidia C compiler (nvc) |
| PGI C compiler | c/pgi | PGI C compiler (pgcc) (website) keywords: compiler language |
| GNU Fortran compiler | fortran/gnu | GNU Fortran compiler (gfortran) (website) keywords: compiler language |
| Intel Fortran compiler | fortran/intel (fortran/default) | Intel Fortran compiler (ifort) (website) keywords: compiler language |
| Intel oneAPI Fortran Compiler | fortran/inteloneapi | Intel oneAPI Fortran compiler (ifx) |
| LLVM Fortran compiler | fortran/llvm | LLVM Fortran compiler (flang) |
| Nvidia FORTRAN compiler | fortran/nvidia | Nvidia FORTRAN compiler (nvfortran) |
| PGI Fortran compiler | fortran/pgi | PGI Fortran compiler (pgf77/pgf90) (website) keywords: compiler language |
| GNU Compiler Collection | gnu | GNU C (gcc), C++ (g++) and Fortran (gfortran) compilers (website) keywords: compiler language |
| GO | go | Go is an open source programming language that makes it easy to build simple, reliable, and efficient software. |
| Intel Compiler Suite | intel | Intel C (icc), C++ (icpc) and Fortran (ifort) compilers (website) keywords: compiler language |
| IntelOneAPI package composed with new compiler icx, icpx, ifx and dpcpp | inteloneapi | Intel oneAPI C (icx), C++ (icpx), DPC++ (dpcpp) and Fortran (ifx) compilers |
| Oracle JDK | java/oracle (java/default) | Oracle Java Runtime and Development Kit (website) keywords: development interpreter language |
| LLVM | llvm | The LLVM Project is a collection of modular and reusable compiler (Clang, Clang++) and toolchain technologies. (website, documentation) keywords: compiler |
| LuaJIT | luajit | a Just-In-Time Compiler for Lua. (website) keywords: compiler |
| Nvidia Compiler Suite | nvhpc | Nvidia C (nvc), C++ (nvc++) and Fortran (nvfortran) compilers |
| PGI Compiler Suite | pgi | PGI C (pgcc), C++ (pgCC) and Fortran (pgf90) compilers and Debugger (pgdb) (website) keywords: compiler language |
| Protocol buffers (protobuf) | protobuf | Protocol buffers are a language-neutral, platform-neutral extensible mechanism for serializing structured data. (website) |
| Yasm | yasm | Yasm is a complete rewrite of the NASM assembler under BSD License. |
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